Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787950.1_cds_XP_016439993.1_334
CDS Infomation

[gene=LOC107765784] [db_xref=GeneID:107765784] [protein=rop guanine nucleotide exchange factor 7-like] [protein_id=XP_016439993.1] [location=join(88541..89117,89733..89849,89974..90128,90337..90411,90497..90787,90881..91237,91371..91859)] [gbkey=CDS]
Sequence

ATGGAGAAAGAGGTTTCTCTGCAATTTCAGCCACAGCTCAAGCATTTTATTCCTATAAAC
ACTTGTACAAAATCCAAGAATCATACCCCTGGCCCTTTTTCAGCATTCAAATTCCAAGTT
TGTAAATCTTTCAAGAATCTGTATCAAAAAGCAAAAGTGTCAAAAGGTTTTGGCAGTAAA
AGGTTTGAATTTGATGAGGTTGTAGTAATGACAAACAACTCGGTTTATTGTGCTTCTCCT
GGTTTTGTTCTTGATGATAAAATGGATGTTTTGAGTGACAAGAATGATGGAATAGAAGGG
AATGTTGATAGTTTTGAGGTGAATGACAGTAAAGTTGAGTGTTTAGTGTATGAAGAGGAA
GGAGGAGAGAGCAGTTTAAGTTCTGAATTCTTGATTTCTGAGGGAACTGTGAATGATGAA
CATGTTAGCTCTGAGGATTCATGTTCACCACCTTCAATTGTTTGGCATATTAAGAAGAAT
GAGGAGCAGCATTGTGCCAATTCTGATGAGTCTGAAGAAGTAGAGAAACCACAAGTGGAT
AATAGGAAGTTAGCAAAACAAGGGTCTAGTTTATCAGAGGTTGAGATGATGAAGGAAAGA
TTTTCAAAGTTGCTGTTGGGTGAAGACATGTCAGGTTGTGGAAATGGGGTTTGCACAGCA
CTTGTAATTTCAAATGCTATAACTAATTTATGTGCTACACTTTTTGGGCAAATTTGGAGA
TTGGAACCTTTACCTACTGAGAAGAGGTTAATGTGGAGAAGAGAAATGGAATGGCTTCTA
TGTGTTAGTAATTACATTGTAGAACTTACACCCTCTTGGCAGACATTTCCAGATGGCTCT
AAGCTTGAGGTAATGACTTCTAGGCCGCGGTTGGACCTTTATGTCAACCTTCCAGCACTC
CGAAAACTAGACAATATGTTACTTGAGATTTTAGACAGTTTCAGAAACAATGAATTCTGG
TATGTTGACCAGGGGATCTTAGGGGAAGACGCTGATGGATCGTCCTCTTTTCGAAATCCT
CTCCCTCGTCAAGAGGAGAAATGGTGGCTTCCTGTTCCTAGGGTCCCCATCGATGGTCTC
AGCGAAAATGCAAAAAAGCAGTTGCAGCACAAACGCGACTGCACAAACCAAATCTTAAAA
GCTGCTATGGCAATCAACAGCAACACCTTAGCTGAAATGGAGGTTCCTGAATCATATCTT
GAAAATCTTCCTAAGAATGGAAAAGCTAGCTTAGGTGATCTTATCCATCGATATATCACC
TCAGATCAATTTTCACCTGAATGTATGCTCGAATGCCTTGATTTGTCTTCTGAGCATCAA
GCATTGGAAATAGCAAACCGAGTGGAGGCCTCAATTTACGTGTGGCGGAGAAGAACTCAC
CCAAAATCCTCAAATAGTATGCTCCGATCCAATTCAAAGTCTTCGTGGGATATGGTTAAA
GATTTAGTGAGTGATGTTGATAAGAGGGAGCTGCTCGCCGATAGAGCTGAAAGCCTTTTG
CTTTGCTTAAAACAACGGTTTCCTGGTCTTCCTCAGACCACCTTAGACATGAGCAAGATC
CAATATAACAAGGATGTTGGGAAATCAATATTGGAGAGCTACTCAAGAGTGCTTGAGAGC
CTGGCATTCAATATTGTGGCTCGTATCGATGACCTTATTTACGTGGATGATTTGACAAAG
CACTCGGATCAATTTGTTCCAATCTCCAAAGTAGGCATCATTGCTCATAAAAGCATTGGA
ACTCCACTCTCGCGACACGTCTCAGGTAGTCAGATCAAAGCACCTTTCACTACACCAATC
TTCTCGCCTTCTCAGCATATTAGTCCAGCAAAGGGAGACAGATCACAGTTTTCTCAGTTT
GGTTTTGGTGTGAAAAAGATGTTGACTGACTATTGGAGTGTTAGTGATTCTAAAGGGAAG
GACTTCAGCGATGAACTTAAGAGATCAGATTCATTTTCGAGCACAGCTCAAGAAGTTTCA
GCAACAGCATCAGTAGGCTCCTCTGAGTGTTCGAGAGAAATTGTCAGCCCATTGACACAT
GACTCACCTGGAGAACAGTAA

Peptide Sequence

PEP ID

XP_016439993.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 7-like [Nicotiana tabacum]
Sequence

MEKEVSLQFQPQLKHFIPINTCTKSKNHTPGPFSAFKFQVCKSFKNLYQKAKVSKGFGSK
RFEFDEVVVMTNNSVYCASPGFVLDDKMDVLSDKNDGIEGNVDSFEVNDSKVECLVYEEE
GGESSLSSEFLISEGTVNDEHVSSEDSCSPPSIVWHIKKNEEQHCANSDESEEVEKPQVD
NRKLAKQGSSLSEVEMMKERFSKLLLGEDMSGCGNGVCTALVISNAITNLCATLFGQIWR
LEPLPTEKRLMWRREMEWLLCVSNYIVELTPSWQTFPDGSKLEVMTSRPRLDLYVNLPAL
RKLDNMLLEILDSFRNNEFWYVDQGILGEDADGSSSFRNPLPRQEEKWWLPVPRVPIDGL
SENAKKQLQHKRDCTNQILKAAMAINSNTLAEMEVPESYLENLPKNGKASLGDLIHRYIT
SDQFSPECMLECLDLSSEHQALEIANRVEASIYVWRRRTHPKSSNSMLRSNSKSSWDMVK
DLVSDVDKRELLADRAESLLLCLKQRFPGLPQTTLDMSKIQYNKDVGKSILESYSRVLES
LAFNIVARIDDLIYVDDLTKHSDQFVPISKVGIIAHKSIGTPLSRHVSGSQIKAPFTTPI
FSPSQHISPAKGDRSQFSQFGFGVKKMLTDYWSVSDSKGKDFSDELKRSDSFSSTAQEVS
ATASVGSSECSREIVSPLTHDSPGEQ

Transcript Sequence

Gene sequence data has not been registered.